PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000309445
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 250aa    MW: 28886.3 Da    PI: 4.9909
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000309445genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM751.8e-2337458128
            NAM  58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    wyfFs++d ky +++r+nr+t  g Wk tgk+++++++ +++++g k+tL+fy+  +pk+ ktdWvmhe+ l
  MDP0000309445   3 WYFFSPKDYKYINSTRSNRTTPGGHWKITGKERAIKDRhSKAVIGKKRTLTFYRRCQPKPIKTDWVMHEFYL 74 
                    9************************************9566679*************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100529.805191IPR003441NAC domain
SuperFamilySSF1019411.16E-26280IPR003441NAC domain
PfamPF023651.7E-11373IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MVWYFFSPKD YKYINSTRSN RTTPGGHWKI TGKERAIKDR HSKAVIGKKR TLTFYRRCQP  60
KPIKTDWVMH EFYLIDSEAI SNPKLHQVRM RTVSSLKFFV MDVDSLKLNA SLVHALQSQD  120
YSSSTYLSSG YIELGDIPQG NANIDDCNAM QSPFGYNNYS YPDKNDISTC DEGEPPSFTM  180
FDFENEVPDH MSQEVCPPRE ENLELFFYPP QPEDYTLEPL MNMTVGDVLH DNNYIAYNEF  240
GPQFEATPSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B1e-1537673144NAC domain-containing protein 19
4dul_A1e-1537673144NAC domain-containing protein 19
1ut7_B1e-1537673144NO APICAL MERISTEM PROTEIN
1ut7_A1e-1537673144NO APICAL MERISTEM PROTEIN
1ut4_B1e-1537673144NO APICAL MERISTEM PROTEIN
1ut4_A1e-1537673144NO APICAL MERISTEM PROTEIN
3swp_D1e-1537676147NAC domain-containing protein 19
3swp_C1e-1537676147NAC domain-containing protein 19
3swp_B1e-1537676147NAC domain-containing protein 19
3swp_A1e-1537676147NAC domain-containing protein 19
3swm_D1e-1537676147NAC domain-containing protein 19
3swm_C1e-1537676147NAC domain-containing protein 19
3swm_B1e-1537676147NAC domain-containing protein 19
3swm_A1e-1537676147NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009376046.17e-95PREDICTED: NAC domain-containing protein 78-like isoform X2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14450518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.11e-21NAC domain containing protein 45